CDS

Accession Number TCMCG023C11077
gbkey CDS
Protein Id PIN16153.1
Location complement(40469..42871)
Organism Handroanthus impetiginosus
locus_tag CDL12_11195

Protein

Length 800aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01001937.1
Definition Splicing factor 1/branch point binding protein (RRM superfamily) [Handroanthus impetiginosus]
Locus_tag CDL12_11195

EGGNOG-MAPPER Annotation

COG_category A
Description Splicing factor 1 helix-hairpin domain
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13095        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0001101        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGACACTCTTCAATCGAATTACATGGATTCCCCGTCGGAACCCCAATCTGAATCCCAACCTCAACCCCAATATTCCTACGATCATCAGAATTACAACAACTCCTACCCCCAAACCCAATCCGAAACCCTTGACAAAACCCTAGATTCTTCAAATCACGTTCCGGAGAACGGAGCTCTCGCGAACGGTGAATCTGGGCCTGATATACCCAAGCCGCTATTATCGGGGAACGGTTTGACCAACACGCAGAGCGGTACCGACAAGGATTTCTCTGGCGGTGAGGAGGAAACCACCAGCCGAAGGAGGCGGCGTTCCAGGTGGGACCCGCCTCCTAGCGAGTCCAGCGGTGGGGGCGCTGCCGGCAGTGATGGAACTGCTGATGGCAACTCCGGGACTGGAGGAAGGAAGCGAAAATCCAGGTGGGCGGATGACGACCCTAAGCCTGTTATCCAGTTGCCTGATTTTATGAAGGATTTCACTGGAGGTATCGAATTCGATCCTGAGATACAAGCTTTGAATAGTCGGTTACTTGAGATTAGTCGCAAGTTGCAATCGGGTATGCTTTTGGATGATAGGCCAGAGGGTGCTAGGTCGCCGTCCCCGGAACCTATCTATGATAACATGGGAGTAAGGATTAATACTAGGGAGTATCGTGCAAGAGAGAAATTGAATAGGGAGAGACAAGAGATTATATCGCAGATTATTAAGAAAAATCCGGCCTTTAAGCCACCTGCAGATTATAGGCCCCCGAAGCTTCAAAAGAAGCTGTATATTCCGATGAAAGAGTACCCAGGTTATAATTTTATTGGGTTAATTATTGGTCCAAGAGGAAATACTCAGAAGAGGATGGAAAGGGAGACCGGAGCAAAGATTGTCATTCGGGGAAAAGGGTCGGTGAAGGAGGGTAGACTTCAACAGAAGAGGGATTTGAAGCCGGATCCTTCAGAGAATGAGGATTTGCATGTGCTGGTGGAGGCAGACACTCAGGAGGCACTTGATGCTGCTGCAGGTATGGTTGAGAAGCTCTTGCAGCCTGTGGATGAGGTTCTCAATGAGCACAAGAGGCAACAGCTTAGGGAGCTTGCAGCTTTGAATGGTACTATTAGGGACGAAGAGTATTGTAGATTGTGTGGTGAGCCTGGGCATCGACAATATGCATGTCCTTCCCGCACATCGACTTTTAAGAGTGATGTTTTGTGTAAGATTTGTGGTGATGGTGGGCATCCGACTATTGATTGTCCAGTGAAGAACACGACTGGCAAGAAAATGGATGATGAATATCAAAACTTCCTCGCAGAACTTGGAGGGACAGTTCCGGAGTCTTCAACCAAGTCAAGCTCTGCAACGCTTGCTCTTCCTGGCAGTTCAGGGACCAATCCTCCTTGGGCAGGTGGGACCAATACTTCCAGTAACACCACGCAAGCTGGTGTAGGGGCAACTCTGATCAAGCCAAAGGAATATGATGAGACAAACTTATATATAGGCTACTTGCCTCCAACTATGGAGGATGATGGTTTGATTAACTTGTTCTCTTCTTTTGGTGAAATTGTGATGGCTAAGGTTATAAAGGACCGTGTATCTGGTTTGAGTAAAGGTTATGGATTTGTGAAGTATGCTGATGTCCAGCAGGCTAATAATGCCATTGCTAGCATGAACGGTTACAAACTAGATGGGAGAACAATTGCCGTGAGAGTCGCTGGTAAACCTCCTCAGCCGACAGTGCCTCCAGGCCCTCCTGCTCCACCTATGCCAACGTATCCTGCTCCAAATCAGCCTGTGGGTGCCTATCCCTCCCAGCAGTATAATACTGGTGGGCCCATTGGAAGTGCACCCCCTGGGAGCTATACTGGAGCTCCGGTTCCTTGGGGACCACCTCCACCTCCTTCATATGCCCCTTACCCCCCTCCTCCACCAGGATCAGCTATGTATCCCCCAGTTCCAGGCCAACCTGTTCCTCAGTATGGAGTGCAATATCCTCCACCACCATTGCCTCCGGGTTCGTCTGGCGTGTCAACACAGACTGTTTCTTCTACTGATACACAGCAAACTTATGCTTCTTCTGGTGACACACAGCAAAGTTACCCGCCTGGAGTGCAATCTCACAGTAGTAGTACACCAGTTCAATCTGTTCCAACCTACGCCTATGGAAATTCAGTGACTTCGATGCCACCAAATGCTCAGGTTCCATACCCAACACCTCCATATAGCTATGCGCCTTATTATGGTGCTGTTCCTCCTCCCCCTCCTCCTGCAGTGCCTCAGTCAACTGTGGACCCTTCCCAAAGCTTGAGTAATGTTCCTTGGGCAGCAAATCCACCAGTACCTCCACCTTCATCATCTGCTGAGAAAAGTAACTACAGCAAAGATGCCGAATATGAGAAGTTCATGTCAGAAATGAAATGA
Protein:  
MDTLQSNYMDSPSEPQSESQPQPQYSYDHQNYNNSYPQTQSETLDKTLDSSNHVPENGALANGESGPDIPKPLLSGNGLTNTQSGTDKDFSGGEEETTSRRRRRSRWDPPPSESSGGGAAGSDGTADGNSGTGGRKRKSRWADDDPKPVIQLPDFMKDFTGGIEFDPEIQALNSRLLEISRKLQSGMLLDDRPEGARSPSPEPIYDNMGVRINTREYRAREKLNRERQEIISQIIKKNPAFKPPADYRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEGRLQQKRDLKPDPSENEDLHVLVEADTQEALDAAAGMVEKLLQPVDEVLNEHKRQQLRELAALNGTIRDEEYCRLCGEPGHRQYACPSRTSTFKSDVLCKICGDGGHPTIDCPVKNTTGKKMDDEYQNFLAELGGTVPESSTKSSSATLALPGSSGTNPPWAGGTNTSSNTTQAGVGATLIKPKEYDETNLYIGYLPPTMEDDGLINLFSSFGEIVMAKVIKDRVSGLSKGYGFVKYADVQQANNAIASMNGYKLDGRTIAVRVAGKPPQPTVPPGPPAPPMPTYPAPNQPVGAYPSQQYNTGGPIGSAPPGSYTGAPVPWGPPPPPSYAPYPPPPPGSAMYPPVPGQPVPQYGVQYPPPPLPPGSSGVSTQTVSSTDTQQTYASSGDTQQSYPPGVQSHSSSTPVQSVPTYAYGNSVTSMPPNAQVPYPTPPYSYAPYYGAVPPPPPPAVPQSTVDPSQSLSNVPWAANPPVPPPSSSAEKSNYSKDAEYEKFMSEMK